IL.23

PUTATIVE ACETYLTRANSFERASE


PDB

The ligand-free form

3c8v_AB [Alignment: 1 2]

The ligand-bound form

3c8v_CD[Alignment: 1 2]


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the structural change



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Ligand

PDB*1

Full name

MG

MAGNESIUM ION

*1 Ligand name designated by the PDB identifiers.


Segments

Component No.

Fixed*1

Moving*1

Motion type

Ligand binding

Coupled motion type

1

D1(474C-475C,0D-97D,103D-246D,257D-433D,442D-445D,448D-470D,473D-473D)

L3(98D-102D)

Local

Independent

2

D2(2C-85C,113C-122C,137C-250C,257C-431C,448C-473C,471D-472D)

L4(432C-445C)

Local

Independent

*1 The location of the fixed and moving segments indicated by the residue number assigned in the ligand-bound form. The background color of characters indicates the corresponding segment in the structure. The colored segments not described in the Table are: 1) a part of component in which the motion is small (< 1.0 A), or, 2) a part of a protomer of homodimers, for which a corresponding part of the other protomer is shown in the Table.


Displacement and disorder

Component No.

RMSD*1

Displacement*2

Disorder-order transition*3

Disorder residue*4

Helix-Coil*5

1

Yes

+3

2

Yes

+13

*1 The root-mean-square displacement of a component of motion calculated for the domain motions.
*2 The mean displacement of a component of motion calculated for the local motions.
*3 Order-disorder transition: Whether the open form contains the disordered structure.
*4 The number of disordered residues.
*5 The number of residues exhibiting the alpha-helix to coil transition.


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