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IID00017
UniprotP06400
ProteinRetinoblastoma-associated protein
GeneRB1
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
928
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 52-355 Monomer :
 Evidence X-RAY 2qdj A Reference
       Region 2qdj A 52-83 order
       Region 2qdj A 84-93 disorder
       Region 2qdj A 94-206 order
       Region 2qdj A 207-209 disorder
       Region 2qdj A 210-244 order
       Region 2qdj A 245-269 disorder
       Region 2qdj A 270-303 order
       Region 2qdj A 304-310 disorder
       Region 2qdj A 311-355 order
Seq 53-244,268-581,641-787 Monomer :
 Evidence X-RAY 4elj A Reference
       Region 4elj A 53-88 order
       Region 4elj A 89-93 disorder
       Region 4elj A 94-176 order
       Region 4elj A 177-184 disorder
       Region 4elj A 185-244 order
       Region 4elj A 268-269 disorder
       Region 4elj A 270-345 order
       Region 4elj A 346-370 disorder
       Region 4elj A 371-503 order
       Region 4elj A 504-507 disorder
       Region 4elj A 508-579 order
       Region 4elj A 580-581 disorder
       Region 4elj A 641-642 disorder
       Region 4elj A 643-771 order
       Region 4elj A 772-787 disorder
Seq 372-589,636-787 Hetero trimer :
 Evidence X-RAY 1gux B Reference
       Region 1gux B 636-644 disorder
       Region 1gux B 645-785 order
       Region 1gux B 786-787 disorder
 Evidence X-RAY 1gux A Reference
       Region 1gux A 372-379 disorder
       Region 1gux A 380-464 order
       Region 1gux A 465-471 disorder
       Region 1gux A 472-499 order
       Region 1gux A 500-513 disorder
       Region 1gux A 514-577 order
       Region 1gux A 578-589 disorder
Seq 372-589,636-787 Hetero trimer : IID00064Complex
 Evidence X-RAY 1o9k H Reference
       Region 1o9k H 636-643 disorder
       Region 1o9k H 644-787 order
 Evidence X-RAY 1o9k F Reference
       Region 1o9k F 636-643 disorder
       Region 1o9k F 644-787 order
 Evidence X-RAY 1o9k D Reference
       Region 1o9k D 636-643 disorder
       Region 1o9k D 644-787 order
 Evidence X-RAY 1o9k B Reference
       Region 1o9k B 636-643 disorder
       Region 1o9k B 644-787 order
 Evidence X-RAY 1o9k G Reference
       Region 1o9k G 372-378 disorder
       Region 1o9k G 379-501 order
       Region 1o9k G 502-507 disorder
       Region 1o9k G 508-578 order
       Region 1o9k G 579-589 disorder
 Evidence X-RAY 1o9k E Reference
       Region 1o9k E 372-378 disorder
       Region 1o9k E 379-501 order
       Region 1o9k E 502-507 disorder
       Region 1o9k E 508-578 order
       Region 1o9k E 579-589 disorder
 Evidence X-RAY 1o9k C Reference
       Region 1o9k C 372-378 disorder
       Region 1o9k C 379-501 order
       Region 1o9k C 502-507 disorder
       Region 1o9k C 508-578 order
       Region 1o9k C 579-589 disorder
 Evidence X-RAY 1o9k A Reference
       Region 1o9k A 372-378 disorder
       Region 1o9k A 379-501 order
       Region 1o9k A 502-507 disorder
       Region 1o9k A 508-578 order
       Region 1o9k A 579-589 disorder
Seq 378-562 Monomer :
 Evidence X-RAY 1ad6 A Reference
       Region 1ad6 A 378-562 order
Seq 379-577,645-772 Hetero dimer : IID90002Complex
 Evidence X-RAY 1gh6 B Reference
       Region 1gh6 B 379-502 order
       Region 1gh6 B 503-509 disorder
       Region 1gh6 B 510-577 order
       Region 1gh6 B 645-772 order
Seq 380-577,643-783 Monomer :
 Evidence X-RAY 3pom A Reference
       Region 3pom A 380-382 disorder
       Region 3pom A 383-577 order
       Region 3pom A 643-783 order
Seq 380-577,643-783 Monomer :
 Evidence X-RAY 3pom B Reference
       Region 3pom B 380-381 disorder
       Region 3pom B 382-501 order
       Region 3pom B 502-509 disorder
       Region 3pom B 510-577 order
       Region 3pom B 643-643 disorder
       Region 3pom B 644-783 order
Seq 380-581,643-785 Hetero dimer : IID00171Complex
 Evidence X-RAY 1n4m A Reference
       Region 1n4m A 380-581 order
       Region 1n4m A 643-785 order
Seq 380-581,643-785 Hetero trimer : IID00171Complex
 Evidence X-RAY 1n4m B Reference
       Region 1n4m B 380-502 order
       Region 1n4m B 503-509 disorder
       Region 1n4m B 510-581 order
       Region 1n4m B 643-785 order
Seq 380-581,643-787 Hetero pentamer : IID90003Complex
 Evidence X-RAY 2r7g C Reference
       Region 2r7g C 380-502 order
       Region 2r7g C 503-508 disorder
       Region 2r7g C 509-579 order
       Region 2r7g C 580-581 disorder
       Region 2r7g C 643-785 order
       Region 2r7g C 786-787 disorder
 Evidence X-RAY 2r7g A Reference
       Region 2r7g A 380-502 order
       Region 2r7g A 503-508 disorder
       Region 2r7g A 509-578 order
       Region 2r7g A 579-581 disorder
       Region 2r7g A 643-785 order
       Region 2r7g A 786-787 disorder
Seq 380-787 Monomer :
 Evidence X-RAY 4ell B Reference
       Region 4ell B 380-383 disorder
       Region 4ell B 384-499 order
       Region 4ell B 500-510 disorder
       Region 4ell B 511-589 order
       Region 4ell B 590-599 disorder
       Region 4ell B 600-609 order
       Region 4ell B 610-642 disorder
       Region 4ell B 643-786 order
       Region 4ell B 787-787 disorder
 Evidence X-RAY 4ell A Reference
       Region 4ell A 380-382 disorder
       Region 4ell A 383-437 order
       Region 4ell A 438-439 disorder
       Region 4ell A 440-499 order
       Region 4ell A 500-511 disorder
       Region 4ell A 512-576 order
       Region 4ell A 577-599 disorder
       Region 4ell A 600-610 order
       Region 4ell A 611-643 disorder
       Region 4ell A 644-783 order
       Region 4ell A 784-787 disorder
Seqdisorder 786-874
 Evidence NMR Reference
       Region 786-874 disorder
Seq 802-817 Hetero tetramer : IID00123Complex
 Evidence X-RAY 4cri D Reference
       Region 4cri D 802-804 disorder
       Region 4cri D 805-810 order
       Region 4cri D 811-817 disorder
 Evidence X-RAY 4cri C Reference
       Region 4cri C 802-803 disorder
       Region 4cri C 804-810 order
       Region 4cri C 811-817 disorder
Seq 829-874 Hetero trimer : IID00064Complex,IID00076Complex
 Evidence X-RAY 2aze C Reference
       Region 2aze C 829-872 order
       Region 2aze C 873-874 disorder
Seq 858-877 Hetero dimer : IID50009Complex
 Evidence X-RAY 1pjm A Reference
       Region 1pjm A 858-877 order
Seq 868-878 Hetero trimer : IID00032Complex
 Evidence X-RAY 1h25 E Reference
       Region 1h25 E 868-868 disorder
       Region 1h25 E 869-878 order
Seq 870-882 Hetero trimer : IID00311Complex
 Evidence X-RAY 3n5u C Reference
       Region 3n5u C 870-872 disorder
       Region 3n5u C 873-879 order
       Region 3n5u C 880-882 disorder
SeqProS verified 804-810 Hetero tetramer : IID00123Complex
       Region 4cri C 804-810 order
       Region 4cri D 805-810 order
       Region 786-874 disorder
SeqProS verified 829-872 Hetero trimer : IID00064Complex,IID00076Complex
       Region 2aze C 829-872 order
       Region 786-874 disorder
SeqProS possible 858-877 NLS Hetero dimer : IID50009Complex
       Region 1pjm A 858-877 order
SeqProS verified 869-874 Hetero trimer : IID00032Complex
       Region 1h25 E 869-878 order
       Region 786-874 disorder
SeqProS verified 872-874 Hetero trimer : IID00311Complex
       Region 3n5u C 873-879 order
       Region 786-874 disorder
Seqphosphorylation
    855-855 Phosphoserine
    841-841 Phosphothreonine
    823-823 Phosphothreonine
    826-826 Phosphothreonine; by CDK4
    821-821 Phosphothreonine; by CDK6
    811-811 Phosphoserine; by CDK1 and CDK3
    795-795 Phosphoserine
    807-807 Phosphoserine; by CDK1 and CDK3
    788-788 Phosphoserine
    780-780 Phosphoserine
    624-624 Phosphoserine
    608-608 Phosphoserine
    612-612 Phosphoserine; by CHEK2 and CHEK1
    567-567 Phosphoserine; by CDK2
    373-373 Phosphothreonine; by CDK1
    356-356 Phosphothreonine
    252-252 Phosphothreonine; by CDK1
    249-249 Phosphoserine; by CDK1
    37-37 Phosphoserine
Seqacetylation
    874-874 N6-acetyllysine; by PCAF
    873-873 N6-acetyllysine; by PCAF
 
Prediction
NeProc
Disorder 1-50,348-381,579-644,773-829,854-928
Order 51-178,183-347,382-501,508-578,645-772,830-853
ProS 348-369,374-381,584-623,640-644,795-810,854-860,873-880,895-918
AlphaFold
Disorder 1-52,84-93,176-184,246-264,304-312,346-372,500-510,580-598,609-642,784-902,904-905,908-908,911-912,915-928
Order 53-83,94-175,185-245,265-303,313-345,373-499,511-579,599-608,643-783,903-903,906-907,909-910,913-914
Pfam Hmmer
PF01858 373-573 6.8e-124
PF01857 645-766 1.4e-76
SEG 2-31
Function
Function in SwissProt
Tumor suppressor that is a key regulator of the G1/S transition of the cell cycle (PubMed:10499802). The hypophosphorylated form binds transcription regulators of the E2F family, preventing transcription of E2F-responsive genes (PubMed:10499802). Both physically blocks E2Fs transactivating domain and recruits chromatin-modifying enzymes that actively repress transcription (PubMed:10499802). Cyclin and CDK-dependent phosphorylation of RB1 induces its dissociation from E2Fs, thereby activating transcription of E2F responsive genes and triggering entry into S phase (PubMed:10499802). RB1 also promotes the G0-G1 transition upon phosphorylation and activation by CDK3/cyclin-C (PubMed:15084261). Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases SUV39H1, KMT5B and KMT5C, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Inhibits the intrinsic kinase activity of TAF1. Mediates transcriptional repression by SMARCA4/BRG1 by recruiting a histone deacetylase (HDAC) complex to the c-FOS promoter. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex (By similarity).
(Microbial infection) In case of viral infections, interactions with SV40 large T antigen, HPV E7 protein or adenovirus E1A protein induce the disassembly of RB1-E2F1 complex thereby disrupting RB1's activity.
Biological Process
Diagram with PDB data
RB1/E2F1/TFDP1Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer
RB1/CCNA1/CDK2CDK2/Cyclin A in complex with an 11-residue recruitment peptide from retinoblastoma-associated protein
RB1/PPP1CACrystal structure of an Rb C-terminal peptide bound to the catalytic subunit of PP1
See also
Diagram with PDB data
LT_SV40/RB1RETINOBLASTOMA POCKET COMPLEXED WITH SV40 LARGE T ANTIGEN
E1A_ADE05/RB1Structure of the retinoblastoma protein pocket domain in complex with adenovirus E1A CR1 domain
E2F1/RB1Crystal structure of the retinoblastoma tumour suppressor protein bound to E2F peptide
E2F2/RB1Structure of Rb tumor suppressor bound to the transactivation domain of E2F-2