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IID00033
UniprotP20393
ProteinNuclear receptor subfamily 1 group D member 1
GeneNR1D1
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
614
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 123-216 Homo dimer :
 Evidence X-RAY 1hlz B Reference
       Region 1hlz B 123-126 disorder
       Region 1hlz B 127-207 order
       Region 1hlz B 208-216 disorder
 Evidence X-RAY 1hlz A Reference
       Region 1hlz A 123-128 disorder
       Region 1hlz A 129-209 order
       Region 1hlz A 210-216 disorder
 Evidence X-RAY 1ga5 F Reference
       Region 1ga5 F 123-128 disorder
       Region 1ga5 F 129-206 order
       Region 1ga5 F 207-216 disorder
 Evidence X-RAY 1ga5 E Reference
       Region 1ga5 E 123-128 disorder
       Region 1ga5 E 129-209 order
       Region 1ga5 E 210-216 disorder
 Evidence X-RAY 1ga5 B Reference
       Region 1ga5 B 123-128 disorder
       Region 1ga5 B 129-207 order
       Region 1ga5 B 208-216 disorder
 Evidence X-RAY 1ga5 A Reference
       Region 1ga5 A 123-128 disorder
       Region 1ga5 A 129-210 order
       Region 1ga5 A 211-216 disorder
 Evidence X-RAY 1a6y B Reference
       Region 1a6y B 123-126 disorder
       Region 1a6y B 127-210 order
       Region 1a6y B 211-216 disorder
 Evidence X-RAY 1a6y A Reference
       Region 1a6y A 123-129 disorder
       Region 1a6y A 130-207 order
       Region 1a6y A 208-216 disorder
Seq 281-323,423-614 Hetero tetramer : IID00189Complex
 Evidence X-RAY 3n00 A Reference
       Region 3n00 A 281-282 disorder
       Region 3n00 A 283-300 order
       Region 3n00 A 301-323 disorder
       Region 3n00 A 423-431 disorder
       Region 3n00 A 432-492 order
       Region 3n00 A 493-506 disorder
       Region 3n00 A 507-611 order
       Region 3n00 A 612-614 disorder
Seq 281-323,423-614 Hetero dimer : IID00189Complex
 Evidence X-RAY 3n00 A Reference
       Region 3n00 A 281-282 disorder
       Region 3n00 A 283-300 order
       Region 3n00 A 301-323 disorder
       Region 3n00 A 423-431 disorder
       Region 3n00 A 432-492 order
       Region 3n00 A 493-506 disorder
       Region 3n00 A 507-611 order
       Region 3n00 A 612-614 disorder
Seqphosphorylation
    55-55 Phosphoserine; by GSK3-beta
    59-59 Phosphoserine; by GSK3-beta
    274-274 Phosphothreonine; by CDK1
Seqacetylation
    191-191 N6-acetyllysine; by KAT5
    192-192 N6-acetyllysine; by KAT5
    591-591 N6-acetyllysine
    400-400 N6-acetyllysine
 
Prediction
NeProc
Disorder 1-127,213-430
Order 128-212,431-614
ProS 8-18,213-238,247-251,279-306,320-337,344-351,359-421
AlphaFold
Disorder 1-128,205-208,210-210,212-213,216-217,220-220,223-224,226-253,255-282,301-429,440-442,512-512,607-614
Order 129-204,209-209,211-211,214-215,218-219,221-222,225-225,254-254,283-300,430-439,443-511,513-606
Pfam Hmmer
PF00105 130-206 3.8e-52
PF00104 444-614 4.9e-41
SEG 14-34 ,69-102 ,245-262 ,362-373 ,586-598
Function
Function in SwissProt
Transcriptional repressor which coordinates circadian rhythm and metabolic pathways in a heme-dependent manner. Integral component of the complex transcription machinery that governs circadian rhythmicity and forms a critical negative limb of the circadian clock by directly repressing the expression of core clock components ARTNL/BMAL1, CLOCK and CRY1. Also regulates genes involved in metabolic functions, including lipid and bile acid metabolism, adipogenesis, gluconeogenesis and the macrophage inflammatory response. Acts as a receptor for heme which stimulates its interaction with the NCOR1/HDAC3 corepressor complex, enhancing transcriptional repression. Recognizes two classes of DNA response elements within the promoter of its target genes and can bind to DNA as either monomers or homodimers, depending on the nature of the response element. Binds as a monomer to a response element composed of the consensus half-site motif 5'-[A/G]GGTCA-3' preceded by an A/T-rich 5' sequence (RevRE), or as a homodimer to a direct repeat of the core motif spaced by two nucleotides (RevDR-2). Acts as a potent competitive repressor of ROR alpha (RORA) function and regulates the levels of its ligand heme by repressing the expression of PPARGC1A, a potent inducer of heme synthesis. Regulates lipid metabolism by repressing the expression of APOC3 and by influencing the activity of sterol response element binding proteins (SREBPs); represses INSIG2 which interferes with the proteolytic activation of SREBPs which in turn govern the rhythmic expression of enzymes with key functions in sterol and fatty acid synthesis. Regulates gluconeogenesis via repression of G6PC1 and PEPCK and adipocyte differentiation via repression of PPARG. Regulates glucagon release in pancreatic alpha-cells via the AMPK-NAMPT-SIRT1 pathway and the proliferation, glucose-induced insulin secretion and expression of key lipogenic genes in pancreatic-beta cells. Positively regulates bile acid synthesis by increasing hepatic expression of CYP7A1 via repression of NR0B2 and NFIL3 which are negative regulators of CYP7A1. Modulates skeletal muscle oxidative capacity by regulating mitochondrial biogenesis and autophagy; controls mitochondrial biogenesis and respiration by interfering with the STK11-PRKAA1/2-SIRT1-PPARGC1A signaling pathway. Represses the expression of SERPINE1/PAI1, an important modulator of cardiovascular disease and the expression of inflammatory cytokines and chemokines in macrophages. Represses gene expression at a distance in macrophages by inhibiting the transcription of enhancer-derived RNAs (eRNAs). Plays a role in the circadian regulation of body temperature and negatively regulates thermogenic transcriptional programs in brown adipose tissue (BAT); imposes a circadian oscillation in BAT activity, increasing body temperature when awake and depressing thermogenesis during sleep. In concert with NR2E3, regulates transcriptional networks critical for photoreceptor development and function. In addition to its activity as a repressor, can also act as a transcriptional activator. In the ovarian granulosa cells acts as a transcriptional activator of STAR which plays a role in steroid biosynthesis. In collaboration with SP1, activates GJA1 transcription in a heme-independent manner. Represses the transcription of CYP2B10, CYP4A10 and CYP4A14 (By similarity). Represses the transcription of CES2 (By similarity). Represses and regulates the circadian expression of TSHB in a NCOR1-dependent manner (By similarity). Negatively regulates the protein stability of NR3C1 and influences the time-dependent subcellular distribution of NR3C1, thereby affecting its transcriptional regulatory activity (By similarity). Plays a critical role in the circadian control of neutrophilic inflammation in the lung; under resting, non-stress conditions, acts as a rhythmic repressor to limit inflammatory activity whereas in the presence of inflammatory triggers undergoes ubiquitin-mediated degradation thereby relieving inhibition of the inflammatory response (By similarity). Plays a key role in the circadian regulation of microglial activation and neuroinflammation; suppresses microglial activation through the NF-kappaB pathway in the central nervous system (By similarity). Plays a role in the regulation of the diurnal rhythms of lipid and protein metabolism in the skeletal muscle via transcriptional repression of genes controlling lipid and amino acid metabolism in the muscle (By similarity).