Search Keyword:


Search option:


IID00701
UniprotP07948
ProteinTyrosine-protein kinase Lyn
GeneLYN
OrganismHomo sapiens
Sequence LLPS PhaSepDB
PhaSePro
LLPSDB
DrLLPS
Network xml rdf
Structure
Experiment
  :order   disorder   conflict   PDB cluster   ProS   Pfam Domain   SEG
512
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 61-123 Monomer :
 Evidence NMR 1w1f A Reference
       Region 1w1f A 61-63 disorder
       Region 1w1f A 64-123 order
       Region 1w1f A 122-123 high_rmsd
Seq 61-123 Hetero dimer : IID90036Complex
 Evidence NMR 1wa7 A Reference
       Region 1wa7 A 61-63 disorder
       Region 1wa7 A 64-123 order
       Region 1wa7 A 123-123 high_rmsd
Seq 233-512 Monomer :
 Evidence X-RAY 3a4o X Reference
       Region 3a4o X 233-237 disorder
       Region 3a4o X 238-391 order
       Region 3a4o X 392-400 disorder
       Region 3a4o X 401-505 order
       Region 3a4o X 506-512 disorder
 Evidence X-RAY 5xy1 A Reference
       Region 5xy1 A 239-391 order
       Region 5xy1 A 392-403 disorder
       Region 5xy1 A 404-502 order
       Region 5xy1 A 503-512 disorder
Seqphosphorylation
    11-11 Phosphoserine
    193-193 Phosphotyrosine
    13-13 Phosphoserine
    228-228 Phosphoserine
    306-306 Phosphotyrosine
    316-316 Phosphotyrosine
    397-397 Phosphotyrosine; by autocatalysis
    508-508 Phosphotyrosine; by autocatalysis
    473-473 Phosphotyrosine
    460-460 Phosphotyrosine
 
Prediction
NeProc
Disorder 1-63,505-512
Order 64-504
ProS 1-20,31-38,505-512
AlphaFold
Disorder 1-65,387-404,503-507,511-512
Order 66-386,405-502,508-510
Pfam Hmmer
PF00018 66-121 4e-26
PF00017 129-211 4.9e-42
PF07714 247-497 3.7e-154
Function
Function in SwissProt
Non-receptor tyrosine-protein kinase that transmits signals from cell surface receptors and plays an important role in the regulation of innate and adaptive immune responses, hematopoiesis, responses to growth factors and cytokines, integrin signaling, but also responses to DNA damage and genotoxic agents. Functions primarily as negative regulator, but can also function as activator, depending on the context. Required for the initiation of the B-cell response, but also for its down-regulation and termination. Plays an important role in the regulation of B-cell differentiation, proliferation, survival and apoptosis, and is important for immune self-tolerance. Acts downstream of several immune receptors, including the B-cell receptor, CD79A, CD79B, CD5, CD19, CD22, FCER1, FCGR2, FCGR1A, TLR2 and TLR4. Plays a role in the inflammatory response to bacterial lipopolysaccharide. Mediates the responses to cytokines and growth factors in hematopoietic progenitors, platelets, erythrocytes, and in mature myeloid cells, such as dendritic cells, neutrophils and eosinophils. Acts downstream of EPOR, KIT, MPL, the chemokine receptor CXCR4, as well as the receptors for IL3, IL5 and CSF2. Plays an important role in integrin signaling. Regulates cell proliferation, survival, differentiation, migration, adhesion, degranulation, and cytokine release. Down-regulates signaling pathways by phosphorylation of immunoreceptor tyrosine-based inhibitory motifs (ITIM), that then serve as binding sites for phosphatases, such as PTPN6/SHP-1, PTPN11/SHP-2 and INPP5D/SHIP-1, that modulate signaling by dephosphorylation of kinases and their substrates. Phosphorylates LIME1 in response to CD22 activation. Phosphorylates BTK, CBL, CD5, CD19, CD72, CD79A, CD79B, CSF2RB, DOK1, HCLS1, LILRB3/PIR-B, MS4A2/FCER1B, SYK and TEC. Promotes phosphorylation of SIRPA, PTPN6/SHP-1, PTPN11/SHP-2 and INPP5D/SHIP-1. Mediates phosphorylation of the BCR-ABL fusion protein. Required for rapid phosphorylation of FER in response to FCER1 activation. Mediates KIT phosphorylation. Acts as an effector of EPOR (erythropoietin receptor) in controlling KIT expression and may play a role in erythroid differentiation during the switch between proliferation and maturation. Depending on the context, activates or inhibits several signaling cascades. Regulates phosphatidylinositol 3-kinase activity and AKT1 activation. Regulates activation of the MAP kinase signaling cascade, including activation of MAP2K1/MEK1, MAPK1/ERK2, MAPK3/ERK1, MAPK8/JNK1 and MAPK9/JNK2. Mediates activation of STAT5A and/or STAT5B. Phosphorylates LPXN on 'Tyr-72'. Kinase activity facilitates TLR4-TLR6 heterodimerization and signal initiation. Phosphorylates SCIMP on 'Tyr-107'; this enhances binding of SCIMP to TLR4, promoting the phosphorylation of TLR4, and a selective cytokine response to lipopolysaccharide in macrophages (By similarity). Phosphorylates CLNK (By similarity).
Biological Process
See also
Diagram with PDB data
SYK/CBLCrystal structure of c-Cbl-TKB domain complexed with its binding motif in Syk